STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78160.1Hypothetical protein. (352 aa)    
Predicted Functional Partners:
tetA1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
  
   
 0.727
AJI79210.1
PFAM: Protein of unknown function (DUF2631).
  
     0.721
AJI77740.1
PFAM: von Willebrand factor type A domain.
  
     0.708
AJI78070.1
Hypothetical protein.
  
     0.683
AJI77894.1
Hypothetical protein.
  
     0.676
AJI77985.1
PFAM: Protein of unknown function (DUF3068).
  
     0.673
AJI78907.1
Hypothetical protein.
 
     0.672
AJI78088.1
Hypothetical protein.
  
     0.671
AJI79885.1
Hypothetical protein.
 
     0.671
AJI78293.1
Hypothetical protein.
  
   
 0.638
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.