STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78195.1PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (202 aa)    
Predicted Functional Partners:
bccA2
acetyl/propionyl-CoA carboxylase, alpha subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme.
       0.817
AJI78197.1
Biotin-dependent carboxylase-like protein; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: sensor histidine kinase inhibitor, KipI family; biotin-dependent carboxylase uncharacterized domain.
       0.786
AJI78198.1
Putative lactam utilization protein B-like protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.786
AJI78547.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.749
AJI79313.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.743
whiH
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
 
  
 0.609
AJI78550.1
TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein, family 7.
 
     0.463
AJI78552.1
TRAP-type C4-dicarboxylate transport system, large permease component; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
    0.454
ilvH
PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit.
  
    0.451
AJI78652.1
PFAM: SIS domain; Helix-turn-helix domain, rpiR family.
  
   
 0.415
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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