STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bccA2acetyl/propionyl-CoA carboxylase, alpha subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme. (578 aa)    
Predicted Functional Partners:
fas-IB
Fatty acid synthase, bacterial type; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Enoyl-(Acyl carrier protein) reductase; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.996
fas-IA
Fatty acid synthase, bacterial type; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.996
AJI78197.1
Biotin-dependent carboxylase-like protein; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: sensor histidine kinase inhibitor, KipI family; biotin-dependent carboxylase uncharacterized domain.
 
   0.992
accD5
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase domain.
 
 0.985
pccB
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase domain.
 
 0.983
dts1
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); PFAM: Carboxyl transferase domain.
  
 0.978
AJI78164.1
PFAM: Acyl-CoA carboxylase epsilon subunit.
   
 0.965
AJI77880.1
PFAM: Beta-ketoacyl synthase, C-terminal domain.
  
  
 0.964
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.953
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 
 0.948
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.