Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI78230.1TIGRFAM: fimbrial isopeptide formation D2 domain. (544 aa)    
Predicted Functional Partners:
srtC1
PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein.
 
     0.922
AJI78231.1
Hypothetical protein.
     
 0.773
AJI79932.1
PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein.
  
     0.693
AJI79935.1
PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein.
  
     0.681
AJI78228.1
Putative collagen-binding protein; PFAM: Cna protein B-type domain; TIGRFAM: LPXTG-motif cell wall anchor domain.
 
   
0.639
AJI77607.1
PFAM: MULE transposase domain.
  
    0.628
AJI79829.1
PFAM: FtsX-like permease family.
  
    0.558
tnp1249a
PFAM: MULE transposase domain.
  
    0.554
AJI78161.1
PFAM: Domain of unknown function (DUF4282).
 
 
 
 0.428
AJI78057.1
PFAM: FtsK/SpoIIIE family; TIGRFAM: type VII secretion protein EccCb; type VII secretion protein EccCa.
    
 
 0.420
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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