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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78255.1Transcriptional regulator, TetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family. (218 aa)    
Predicted Functional Partners:
puo1
Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase.
 
     0.858
AJI78252.1
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: Amino acid permease; TC 2.A.3.
 
     0.849
AJI78253.1
PFAM: Universal stress protein family.
 
    0.825
puo2
Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase.
 
     0.726
AJI78268.1
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: Amino acid permease; TC 2.A.3.
 
     0.718
AJI78269.1
PFAM: Universal stress protein family.
 
    0.654
ssdA1
PFAM: Aldehyde dehydrogenase family.
       0.496
AJI78264.1
PFAM: PucR C-terminal helix-turn-helix domain; Purine catabolism regulatory protein-like family.
  
     0.414
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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