STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhCZn-dependent alcohol dehydrogenase, class III; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (372 aa)    
Predicted Functional Partners:
nifA
PFAM: PucR C-terminal helix-turn-helix domain; GAF domain.
       0.631
AJI78256.1
Hypothetical protein.
       0.607
adhC2
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
  
 
 
0.546
AJI79716.1
tRNA-Glu; IMG reference gene:2600317014.
  
  
 0.538
AJI79865.1
Hypothetical protein.
  
  
 0.527
cmtA
PFAM: Putative esterase.
  
 
 0.493
AJI77858.1
PFAM: Putative esterase.
  
 
 0.493
AJI78237.1
PFAM: Putative esterase.
  
 
 0.493
AJI79549.1
PFAM: Putative esterase.
  
 
 0.493
AJI79745.1
PFAM: Putative esterase.
  
 
 0.493
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.