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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78259.1Putative membrane protein. (436 aa)    
Predicted Functional Partners:
nifA
PFAM: PucR C-terminal helix-turn-helix domain; GAF domain.
       0.727
AJI79409.1
Tellurite resistance protein-like permease; PFAM: Voltage-dependent anion channel.
  
     0.544
lipN
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
       0.532
AJI78261.1
Putative flavoprotein involved in K+ transport; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
       0.527
gabT1
PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.508
adhC
Zn-dependent alcohol dehydrogenase, class III; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
     
 0.498
brnQ
Branched-chain amino acid uptake carrier; Component of the transport system for branched-chain amino acids.
  
     0.411
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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