STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipNEsterase/lipase; PFAM: alpha/beta hydrolase fold. (326 aa)    
Predicted Functional Partners:
AJI78261.1
Putative flavoprotein involved in K+ transport; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
    0.934
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.675
gabT1
PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.614
AJI78259.1
Putative membrane protein.
       0.530
nifA
PFAM: PucR C-terminal helix-turn-helix domain; GAF domain.
       0.498
AJI79391.1
PFAM: Cytochrome P450.
  
 
 
 0.458
AJI78754.1
Hypothetical protein.
  
   0.455
irp2C
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Nonribosomal peptide synthase; Condensation domain; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
  
 
 0.438
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor; PFAM: Rieske [2Fe-2S] domain.
    
   0.435
AJI78263.1
PFAM: PucR C-terminal helix-turn-helix domain; Purine catabolism regulatory protein-like family.
       0.426
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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