Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI78278.1TIGRFAM: TIGR03089 family protein. (227 aa)    
Predicted Functional Partners:
AJI77880.1
PFAM: Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.755
fas-IB
Fatty acid synthase, bacterial type; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Enoyl-(Acyl carrier protein) reductase; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.755
fas-IA
Fatty acid synthase, bacterial type; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.755
lytR2
PFAM: Cell envelope-related transcriptional attenuator domain; LytR cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
     
 0.753
AJI78277.1
Protein of unknown function DUF81; PFAM: Sulfite exporter TauE/SafE.
       0.731
AJI78735.1
Hypothetical protein.
  
    0.698
AJI79022.1
Putative membrane protein; PFAM: DoxX.
  
     0.697
AJI78409.1
Putative membrane protein; PFAM: Protein of unknown function, DUF485.
 
  
 0.677
rpfA
PFAM: Protein of unknown function (DUF3235); Transglycosylase-like domain.
  
     0.643
fadB
PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 
 0.635
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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