Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJI78856.1 | AJI79352.1 | CSING_06620 | CSING_09170 | PFAM: Bacterial PH domain. | Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.773 |
| AJI78856.1 | AJI80028.1 | CSING_06620 | CSING_12705 | PFAM: Bacterial PH domain. | Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family. | 0.771 |
| AJI78856.1 | csm | CSING_06620 | CSING_04500 | PFAM: Bacterial PH domain. | PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type. | 0.772 |
| AJI78856.1 | tyrA | CSING_06620 | CSING_00805 | PFAM: Bacterial PH domain. | PFAM: Prephenate dehydrogenase. | 0.433 |
| AJI79352.1 | AJI78856.1 | CSING_09170 | CSING_06620 | Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | PFAM: Bacterial PH domain. | 0.773 |
| AJI79352.1 | AJI80028.1 | CSING_09170 | CSING_12705 | Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family. | 0.774 |
| AJI79352.1 | aroG | CSING_09170 | CSING_09165 | Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II. | 0.717 |
| AJI79352.1 | csm | CSING_09170 | CSING_04500 | Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type. | 0.774 |
| AJI80028.1 | AJI78856.1 | CSING_12705 | CSING_06620 | Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family. | PFAM: Bacterial PH domain. | 0.771 |
| AJI80028.1 | AJI79352.1 | CSING_12705 | CSING_09170 | Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family. | Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.774 |
| AJI80028.1 | csm | CSING_12705 | CSING_04500 | Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family. | PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type. | 0.772 |
| aroC | csm | CSING_07600 | CSING_04500 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type. | 0.966 |
| aroC | menF | CSING_07600 | CSING_06225 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Isochorismate synthase; PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases. | 0.913 |
| aroC | pheA | CSING_07600 | CSING_12520 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | PFAM: Prephenate dehydratase; ACT domain. | 0.690 |
| aroC | trpE | CSING_07600 | CSING_13060 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: anthranilate synthase component I, proteobacterial subset. | 0.975 |
| aroC | trpG | CSING_07600 | CSING_13065 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate/para-aminobenzoate synthase component II; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase. | 0.955 |
| aroC | tyrA | CSING_07600 | CSING_00805 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | PFAM: Prephenate dehydrogenase. | 0.888 |
| aroG | AJI79352.1 | CSING_09165 | CSING_09170 | PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II. | Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.717 |
| aroG | csm | CSING_09165 | CSING_04500 | PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II. | PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type. | 0.999 |
| csm | AJI78856.1 | CSING_04500 | CSING_06620 | PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type. | PFAM: Bacterial PH domain. | 0.772 |
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