STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78481.1Putative integral membrane protein; PFAM: Putative zinc-finger. (229 aa)    
Predicted Functional Partners:
AJI78480.1
Putative membrane protein; PFAM: DoxX.
       0.832
AJI78550.1
TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein, family 7.
   
 
 0.782
AJI78856.1
PFAM: Bacterial PH domain.
  
     0.749
AJI79726.1
PFAM: Protein of unknown function (DUF2993).
  
     0.708
AJI80015.1
PFAM: Domain of unknown function (DUF2020).
  
     0.708
AJI78579.1
Hypothetical protein.
  
     0.688
AJI78479.1
PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase.
       0.683
AJI78088.1
Hypothetical protein.
  
     0.678
AJI78334.1
Hypothetical protein.
  
     0.673
AJI78822.1
PFAM: Protein of unknown function (DUF3515).
  
     0.656
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.