STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78486.1Cyanate permease; PFAM: Major Facilitator Superfamily. (397 aa)    
Predicted Functional Partners:
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.832
AJI79194.1
PFAM: Protein of unknown function (DUF328); Belongs to the UPF0246 family.
 
    0.801
betP
PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.578
AJI78487.1
PFAM: Plasmid maintenance system killer protein.
       0.524
AJI78488.1
PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family.
       0.524
rsmI
16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.504
theD
PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase.
  
    0.496
pmt
PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.451
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.