Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJI78331.1 | AJI78536.1 | CSING_03920 | CSING_04980 | Putative hydrolase; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase. | PFAM: Protein of unknown function (DUF501). | 0.564 |
AJI78331.1 | AJI78960.1 | CSING_03920 | CSING_07145 | Putative hydrolase; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase. | PFAM: MerR HTH family regulatory protein. | 0.707 |
AJI78331.1 | AJI79105.1 | CSING_03920 | CSING_07930 | Putative hydrolase; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase. | PFAM: Domain of unknown function (DUF4193). | 0.747 |
AJI78331.1 | AJI79225.1 | CSING_03920 | CSING_08530 | Putative hydrolase; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase. | PFAM: Protein of unknown function (DUF2469). | 0.502 |
AJI78331.1 | whiB1 | CSING_03920 | CSING_03850 | Putative hydrolase; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.646 |
AJI78331.1 | whiB2 | CSING_03920 | CSING_03680 | Putative hydrolase; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.610 |
AJI78533.1 | AJI78535.1 | CSING_04965 | CSING_04975 | Hypothetical protein. | PFAM: Septum formation initiator. | 0.549 |
AJI78533.1 | AJI78536.1 | CSING_04965 | CSING_04980 | Hypothetical protein. | PFAM: Protein of unknown function (DUF501). | 0.533 |
AJI78533.1 | eno | CSING_04965 | CSING_04970 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.653 |
AJI78533.1 | ppx2 | CSING_04965 | CSING_04985 | Hypothetical protein. | PFAM: Ppx/GppA phosphatase family. | 0.525 |
AJI78535.1 | AJI78533.1 | CSING_04975 | CSING_04965 | PFAM: Septum formation initiator. | Hypothetical protein. | 0.549 |
AJI78535.1 | AJI78536.1 | CSING_04975 | CSING_04980 | PFAM: Septum formation initiator. | PFAM: Protein of unknown function (DUF501). | 0.773 |
AJI78535.1 | eno | CSING_04975 | CSING_04970 | PFAM: Septum formation initiator. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.668 |
AJI78535.1 | ppx2 | CSING_04975 | CSING_04985 | PFAM: Septum formation initiator. | PFAM: Ppx/GppA phosphatase family. | 0.850 |
AJI78536.1 | AJI78331.1 | CSING_04980 | CSING_03920 | PFAM: Protein of unknown function (DUF501). | Putative hydrolase; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase. | 0.564 |
AJI78536.1 | AJI78533.1 | CSING_04980 | CSING_04965 | PFAM: Protein of unknown function (DUF501). | Hypothetical protein. | 0.533 |
AJI78536.1 | AJI78535.1 | CSING_04980 | CSING_04975 | PFAM: Protein of unknown function (DUF501). | PFAM: Septum formation initiator. | 0.773 |
AJI78536.1 | AJI78960.1 | CSING_04980 | CSING_07145 | PFAM: Protein of unknown function (DUF501). | PFAM: MerR HTH family regulatory protein. | 0.650 |
AJI78536.1 | AJI79105.1 | CSING_04980 | CSING_07930 | PFAM: Protein of unknown function (DUF501). | PFAM: Domain of unknown function (DUF4193). | 0.528 |
AJI78536.1 | AJI79225.1 | CSING_04980 | CSING_08530 | PFAM: Protein of unknown function (DUF501). | PFAM: Protein of unknown function (DUF2469). | 0.484 |
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