STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78613.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
AJI78612.1
PFAM: Protein of unknown function (DUF402).
  
  
 0.885
AJI78611.1
PFAM: Protein of unknown function (DUF808).
       0.743
AJI78614.1
GTP-binding protein TypA/BipA; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain.
       0.633
AJI78896.1
Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family.
   
  
 0.577
ftsW
Cell division-specific peptidoglycan biosynthesis regulator FtsW; PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; Belongs to the SEDS family.
   
    0.565
AJI78615.1
PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.536
mshB
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
       0.536
AJI78617.1
Hypothetical protein.
       0.536
fdxC
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.508
dapC2
PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase.
       0.508
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.