STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bltArabinose efflux permease family protein; PFAM: Sugar (and other) transporter; Major Facilitator Superfamily. (407 aa)    
Predicted Functional Partners:
AJI78650.1
Hypothetical protein.
       0.678
AJI78595.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.523
AJI78652.1
PFAM: SIS domain; Helix-turn-helix domain, rpiR family.
  
    0.517
AJI78875.1
Hypothetical protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi- mannosylated polymer (LM-B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha- D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)- (1->3)-glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue.
  
     0.481
mptA
TIGRFAM: carotene biosynthesis associated membrane protein.
  
     0.424
AJI78570.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
  
    0.408
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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