Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI78726.1Hypothetical protein. (382 aa)    
Predicted Functional Partners:
AJI78725.1
NUDIX family protein; PFAM: NUDIX domain.
       0.813
etfB
PFAM: Electron transfer flavoprotein domain.
       0.752
etfA
PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
       0.736
iscS
Cysteine desulfurase family protein; PFAM: Aminotransferase class-V.
       0.736
AJI78724.1
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter.
       0.703
AJI78323.1
TIGRFAM: TIGR02569 family protein.
 
    0.691
AJI78073.1
Dienelactone hydrolase-like enzyme; PFAM: Alpha/beta hydrolase family.
  
     0.682
AJI79991.1
PFAM: Septum formation.
  
     0.671
AJI79678.1
PFAM: Domain of unknown function (DUF2017).
  
     0.668
AJI78319.1
Hypothetical protein.
  
     0.657
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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