STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78735.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
     0.849
AJI79439.1
PFAM: Protein of unknown function (DUF3052).
  
     0.744
AJI78733.1
PFAM: Methyltransferase domain.
 
   
 0.737
AJI78278.1
TIGRFAM: TIGR03089 family protein.
 
    0.696
metF
PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.672
AJI80039.1
Putative integral membrane protein; PFAM: Protein of unknown function (DUF2029).
  
     0.672
AJI79645.1
Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain.
  
     0.659
AJI79328.1
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
     0.651
AJI77821.1
TIGRFAM: helicase/secretion neighborhood CpaE-like protein.
  
    0.646
AJI79169.1
TIGR03085 family protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03085 family protein; uncharacterized Actinobacterial protein TIGR03083.
  
    0.629
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.