Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI78747.1Putative ATPase (AAA+ superfamily); PFAM: AAA domain; Domain of unknown function (DUF4143). (436 aa)    
Predicted Functional Partners:
AJI77646.1
Hypothetical protein; PFAM: Fic/DOC family N-terminal; Fic/DOC family.
 
     0.725
AJI78156.1
Putative ATPase (AAA+ superfamily); PFAM: AAA domain; Domain of unknown function (DUF4143).
  
     0.723
AJI77882.1
Hypothetical protein; PFAM: Fic/DOC family.
 
     0.698
AJI80087.1
Hypothetical protein; PFAM: Fic/DOC family.
 
     0.696
ligA
DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
       0.603
AJI78749.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB.
       0.603
AJI78750.1
Putative HAD superfamily hydrolase; PFAM: haloacid dehalogenase-like hydrolase.
       0.603
dnaQ2
DNA polymerase III epsilon subunit-like 3'-5' exonuclease; PFAM: Exonuclease.
       0.556
AJI77689.1
PFAM: Transposase DDE domain.
  
     0.470
AJI78569.1
PFAM: Transposase DDE domain.
  
     0.468
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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