Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AJI78751.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
rpsD
SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
 
   0.784
AJI80041.1
Hypothetical protein.
  
     0.754
AJI78145.1
Hypothetical protein.
  
     0.750
AJI77728.1
TIGRFAM: putative tRNA adenosine deaminase-associated protein.
  
     0.739
AJI79671.1
Glucitol operon activator.
  
     0.734
uspA2
PFAM: Universal stress protein family.
   
    0.734
AJI78141.1
Putative membrane protein; PFAM: Virulence factor BrkB; TIGRFAM: inner membrane protein YhjD; YihY family inner membrane protein.
 
    0.732
AJI79633.1
Hypothetical protein.
  
     0.724
rplB
Ribosomal protein L2, bacterial/organellar; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
   
   0.717
AJI77900.1
PFAM: Glutaredoxin-like domain (DUF836).
  
     0.715
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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