Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJI78763.1 | AJI78764.1 | CSING_06140 | CSING_06145 | Putative membrane protein; PFAM: DoxX. | Hypothetical protein. | 0.544 |
AJI78763.1 | AJI78765.1 | CSING_06140 | CSING_06150 | Putative membrane protein; PFAM: DoxX. | PFAM: Winged helix DNA-binding domain. | 0.604 |
AJI78763.1 | AJI78767.1 | CSING_06140 | CSING_06160 | Putative membrane protein; PFAM: DoxX. | PFAM: Protein of unknown function (DUF2029). | 0.700 |
AJI78763.1 | lysG | CSING_06140 | CSING_06135 | Putative membrane protein; PFAM: DoxX. | Transcriptional regulator, ArgP family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | 0.766 |
AJI78764.1 | AJI78763.1 | CSING_06145 | CSING_06140 | Hypothetical protein. | Putative membrane protein; PFAM: DoxX. | 0.544 |
AJI78764.1 | AJI78765.1 | CSING_06145 | CSING_06150 | Hypothetical protein. | PFAM: Winged helix DNA-binding domain. | 0.780 |
AJI78764.1 | AJI78766.1 | CSING_06145 | CSING_06155 | Hypothetical protein. | PFAM: Acyltransferase family. | 0.548 |
AJI78764.1 | AJI78767.1 | CSING_06145 | CSING_06160 | Hypothetical protein. | PFAM: Protein of unknown function (DUF2029). | 0.548 |
AJI78764.1 | lysG | CSING_06145 | CSING_06135 | Hypothetical protein. | Transcriptional regulator, ArgP family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | 0.480 |
AJI78765.1 | AJI78763.1 | CSING_06150 | CSING_06140 | PFAM: Winged helix DNA-binding domain. | Putative membrane protein; PFAM: DoxX. | 0.604 |
AJI78765.1 | AJI78764.1 | CSING_06150 | CSING_06145 | PFAM: Winged helix DNA-binding domain. | Hypothetical protein. | 0.780 |
AJI78765.1 | AJI78766.1 | CSING_06150 | CSING_06155 | PFAM: Winged helix DNA-binding domain. | PFAM: Acyltransferase family. | 0.548 |
AJI78765.1 | AJI78767.1 | CSING_06150 | CSING_06160 | PFAM: Winged helix DNA-binding domain. | PFAM: Protein of unknown function (DUF2029). | 0.548 |
AJI78765.1 | lysG | CSING_06150 | CSING_06135 | PFAM: Winged helix DNA-binding domain. | Transcriptional regulator, ArgP family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | 0.481 |
AJI78766.1 | AJI78764.1 | CSING_06155 | CSING_06145 | PFAM: Acyltransferase family. | Hypothetical protein. | 0.548 |
AJI78766.1 | AJI78765.1 | CSING_06155 | CSING_06150 | PFAM: Acyltransferase family. | PFAM: Winged helix DNA-binding domain. | 0.548 |
AJI78766.1 | AJI78767.1 | CSING_06155 | CSING_06160 | PFAM: Acyltransferase family. | PFAM: Protein of unknown function (DUF2029). | 0.819 |
AJI78767.1 | AJI78763.1 | CSING_06160 | CSING_06140 | PFAM: Protein of unknown function (DUF2029). | Putative membrane protein; PFAM: DoxX. | 0.700 |
AJI78767.1 | AJI78764.1 | CSING_06160 | CSING_06145 | PFAM: Protein of unknown function (DUF2029). | Hypothetical protein. | 0.548 |
AJI78767.1 | AJI78765.1 | CSING_06160 | CSING_06150 | PFAM: Protein of unknown function (DUF2029). | PFAM: Winged helix DNA-binding domain. | 0.548 |
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