STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tetA2ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (513 aa)    
Predicted Functional Partners:
tetB2
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
    0.948
tetB1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
    0.782
AJI77913.1
PFAM: ABC transporter.
  
     0.756
AJI78026.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  0.749
AJI78791.1
PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family.
       0.718
AJI78792.1
Hypothetical protein.
       0.704
AJI78445.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
     0.699
phnC-4
PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA.
  
     0.697
AJI79139.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
     0.677
AJI77843.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  0.625
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.