Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI78794.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
AJI78319.1
Hypothetical protein.
 
  
 0.783
AJI78088.1
Hypothetical protein.
 
 
   0.781
AJI77945.1
Hypothetical protein.
  
     0.774
AJI78822.1
PFAM: Protein of unknown function (DUF3515).
  
     0.774
AJI79879.1
Hypothetical protein.
  
     0.774
AJI80011.1
Hypothetical protein.
  
     0.773
AJI80112.1
Hypothetical protein.
  
     0.773
AJI78763.1
Putative membrane protein; PFAM: DoxX.
 
     0.772
pyrD1
Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.772
AJI79210.1
PFAM: Protein of unknown function (DUF2631).
  
     0.772
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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