Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJI78831.1 | AJI78832.1 | CSING_06495 | CSING_06500 | PFAM: Putative bacterial sensory transduction regulator. | Hypothetical protein. | 0.797 |
AJI78831.1 | AJI78833.1 | CSING_06495 | CSING_06505 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Putative bacterial sensory transduction regulator. | 0.795 |
AJI78831.1 | AJI78834.1 | CSING_06495 | CSING_06510 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Putative bacterial sensory transduction regulator. | 0.795 |
AJI78831.1 | AJI78835.1 | CSING_06495 | CSING_06515 | PFAM: Putative bacterial sensory transduction regulator. | TIGR01777 family protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein. | 0.577 |
AJI78832.1 | AJI78831.1 | CSING_06500 | CSING_06495 | Hypothetical protein. | PFAM: Putative bacterial sensory transduction regulator. | 0.797 |
AJI78832.1 | AJI78833.1 | CSING_06500 | CSING_06505 | Hypothetical protein. | PFAM: Putative bacterial sensory transduction regulator. | 0.795 |
AJI78832.1 | AJI78834.1 | CSING_06500 | CSING_06510 | Hypothetical protein. | PFAM: Putative bacterial sensory transduction regulator. | 0.795 |
AJI78832.1 | AJI78835.1 | CSING_06500 | CSING_06515 | Hypothetical protein. | TIGR01777 family protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein. | 0.577 |
AJI78833.1 | AJI78831.1 | CSING_06505 | CSING_06495 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Putative bacterial sensory transduction regulator. | 0.795 |
AJI78833.1 | AJI78832.1 | CSING_06505 | CSING_06500 | PFAM: Putative bacterial sensory transduction regulator. | Hypothetical protein. | 0.795 |
AJI78833.1 | AJI78834.1 | CSING_06505 | CSING_06510 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Putative bacterial sensory transduction regulator. | 0.824 |
AJI78833.1 | AJI78835.1 | CSING_06505 | CSING_06515 | PFAM: Putative bacterial sensory transduction regulator. | TIGR01777 family protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein. | 0.688 |
AJI78833.1 | carA | CSING_06505 | CSING_06535 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.529 |
AJI78833.1 | carB | CSING_06505 | CSING_06540 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.512 |
AJI78833.1 | pyrB | CSING_06505 | CSING_06525 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.579 |
AJI78833.1 | pyrC | CSING_06505 | CSING_06530 | PFAM: Putative bacterial sensory transduction regulator. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.566 |
AJI78833.1 | pyrF | CSING_06505 | CSING_06545 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.512 |
AJI78833.1 | pyrR | CSING_06505 | CSING_06520 | PFAM: Putative bacterial sensory transduction regulator. | Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.579 |
AJI78834.1 | AJI78831.1 | CSING_06510 | CSING_06495 | PFAM: Putative bacterial sensory transduction regulator. | PFAM: Putative bacterial sensory transduction regulator. | 0.795 |
AJI78834.1 | AJI78832.1 | CSING_06510 | CSING_06500 | PFAM: Putative bacterial sensory transduction regulator. | Hypothetical protein. | 0.795 |
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