STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yurYPFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC. (252 aa)    
Predicted Functional Partners:
AJI78877.1
Iron-regulated ABC transporter membrane component SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 0.999
sufD
Iron-regulated ABC transporter permease protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
 
 
 0.998
csd
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.980
nifU
PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family.
 
  
 0.972
AJI78882.1
Putative metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59.
 
  
 0.920
AJI77674.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
  
  
 0.729
sufR
Transcriptional regulator; PFAM: Helix-turn-helix domain.
  
    0.683
AJI78874.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
      
0.581
AJI78875.1
Hypothetical protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi- mannosylated polymer (LM-B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha- D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)- (1->3)-glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue.
       0.581
AJI78873.1
PFAM: ABC-2 family transporter protein; TIGRFAM: ABC transporter efflux protein, DrrB family.
     
 0.557
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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