STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfaMethyltransferase, cyclopropane fatty acid synthase; PFAM: Mycolic acid cyclopropane synthetase. (430 aa)    
Predicted Functional Partners:
cma
Methyltransferase, cyclopropane fatty acid synthase; PFAM: Mycolic acid cyclopropane synthetase.
 
     0.666
irp2C
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Nonribosomal peptide synthase; Condensation domain; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
     
 0.663
ndh
NADH dehydrogenase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
       0.661
AJI78948.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
  
    0.606
AJI77629.1
Putative acetyltransferase/hydrolase with alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase family.
  
     0.588
theD
PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase.
     
 0.578
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
     
 0.564
lytR1
Transcriptional attenuator, LytR family; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
   
    0.508
AJI78088.1
Hypothetical protein.
  
     0.484
AJI80071.1
PFAM: Predicted membrane protein (DUF2339).
  
     0.461
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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