STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78959.1PFAM: von Willebrand factor type A domain. (293 aa)    
Predicted Functional Partners:
AJI78957.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
  
    0.709
AJI78958.1
Hypothetical protein.
       0.704
AJI78712.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; Tetratricopeptide repeat.
   
    0.596
AJI79963.1
Decaprenyl-phosphate phosphoribosyltransferase; PFAM: UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
   
  
 0.564
etfA
PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
   
    0.505
glfT2
PFAM: Glycosyltransferase like family 2.
   
    0.503
AJI78956.1
Hypothetical protein.
       0.413
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.