Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI78962.1Putative transcriptional regulator; PFAM: MerR family regulatory protein. (249 aa)    
Predicted Functional Partners:
odhI
FHA domain-containing protein; PFAM: FHA domain.
 
    0.765
AJI78961.1
Hypothetical protein; PFAM: Bifunctional nuclease.
     
 0.764
AJI78960.1
PFAM: MerR HTH family regulatory protein.
 
   
 0.752
AJI79678.1
PFAM: Domain of unknown function (DUF2017).
   
    0.735
secA2
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
  
  
 0.577
AJI79121.1
ATP-grasp superfamily enzyme; PFAM: PAC2 family.
  
     0.553
AJI78864.1
Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
  
 0.533
AJI78842.1
Hypothetical protein.
  
    0.526
AJI78965.1
PFAM: Alpha/beta hydrolase family.
       0.507
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
   0.476
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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