Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
odhIFHA domain-containing protein; PFAM: FHA domain. (143 aa)    
Predicted Functional Partners:
pknB
PFAM: Protein kinase domain; PASTA domain.
 
 
 
 0.987
odhA
PFAM: Dehydrogenase E1 component; 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component.
    
 
 0.987
pknG
PFAM: Protein kinase domain.
 
 
 
 0.974
pknL
PFAM: Protein kinase domain.
 
 
 
 0.965
AJI77601.1
PFAM: Protein kinase domain.
 
 
 
 0.935
AJI77606.1
PFAM: Protein of unknown function (DUF2662); FHA domain.
  
   
 0.769
AJI78962.1
Putative transcriptional regulator; PFAM: MerR family regulatory protein.
 
    0.765
AJI77605.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.761
AJI78187.1
Hypothetical protein.
   
 
 0.744
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.741
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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