STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcuBPFAM: Anaerobic c4-dicarboxylate membrane transporter; TIGRFAM: anaerobic c4-dicarboxylate membrane transporter family protein. (461 aa)    
Predicted Functional Partners:
yhcL
PFAM: C4-dicarboxylate anaerobic carrier; TIGRFAM: c4-dicarboxylate anaerobic carrier family protein.
  
   
 0.702
AJI78077.1
PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain.
  
     0.649
AJI78511.1
PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain.
  
     0.631
AJI78757.1
PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain.
  
     0.609
sdaC
PFAM: Transmembrane amino acid transporter protein; TIGRFAM: serine transporter.
  
    0.501
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.489
cmk
PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase.
       0.489
AJI78982.1
PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
       0.488
AJI78273.1
Amino acid permease; PFAM: Tryptophan/tyrosine permease family; TIGRFAM: serine transporter.
  
    0.485
tdcC1
PFAM: Amino acid permease; TIGRFAM: serine transporter.
  
    0.477
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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