STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78989.1PFAM: Protein of unknown function (DUF3186). (320 aa)    
Predicted Functional Partners:
AJI78990.1
Putative membrane-anchored protein; PFAM: Thiamine pyrophosphokinase C terminal.
 
  
 0.957
AJI78988.1
NTP pyrophosphohydrolase; PFAM: NUDIX domain.
       0.824
recN
DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.775
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
    0.748
AJI78856.1
PFAM: Bacterial PH domain.
  
     0.747
AJI78089.1
Hypothetical protein.
  
     0.739
AJI78308.1
Hypothetical protein.
  
     0.738
AJI80112.1
Hypothetical protein.
  
     0.734
AJI78794.1
Hypothetical protein.
  
     0.706
AJI79162.1
Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family.
  
     0.705
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.