node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJI79019.1 | AJI79021.1 | CSING_07460 | CSING_07470 | Hypothetical protein. | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | 0.624 |
AJI79019.1 | AJI79022.1 | CSING_07460 | CSING_07475 | Hypothetical protein. | Putative membrane protein; PFAM: DoxX. | 0.475 |
AJI79019.1 | infC | CSING_07460 | CSING_07455 | Hypothetical protein. | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | 0.568 |
AJI79019.1 | rpmI | CSING_07460 | CSING_07450 | Hypothetical protein. | PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.488 |
AJI79019.1 | uvrA | CSING_07460 | CSING_07465 | Hypothetical protein. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.824 |
AJI79021.1 | AJI79019.1 | CSING_07470 | CSING_07460 | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | Hypothetical protein. | 0.624 |
AJI79021.1 | AJI79022.1 | CSING_07470 | CSING_07475 | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | Putative membrane protein; PFAM: DoxX. | 0.742 |
AJI79021.1 | infC | CSING_07470 | CSING_07455 | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | 0.567 |
AJI79021.1 | rpmI | CSING_07470 | CSING_07450 | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.513 |
AJI79021.1 | uvrA | CSING_07470 | CSING_07465 | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.690 |
AJI79022.1 | AJI79019.1 | CSING_07475 | CSING_07460 | Putative membrane protein; PFAM: DoxX. | Hypothetical protein. | 0.475 |
AJI79022.1 | AJI79021.1 | CSING_07475 | CSING_07470 | Putative membrane protein; PFAM: DoxX. | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | 0.742 |
AJI79022.1 | uvrA | CSING_07475 | CSING_07465 | Putative membrane protein; PFAM: DoxX. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.608 |
infC | AJI79019.1 | CSING_07455 | CSING_07460 | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | Hypothetical protein. | 0.568 |
infC | AJI79021.1 | CSING_07455 | CSING_07470 | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. | 0.567 |
infC | rplT | CSING_07455 | CSING_07445 | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.989 |
infC | rpmI | CSING_07455 | CSING_07450 | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.976 |
infC | uvrA | CSING_07455 | CSING_07465 | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.652 |
mfd | uvrA | CSING_04940 | CSING_07465 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.747 |
mfd | uvrA2 | CSING_04940 | CSING_01920 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | 0.747 |