STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79024.1PFAM: Uncharacterized conserved protein (DUF2183). (336 aa)    
Predicted Functional Partners:
AJI79023.1
PFAM: Part of AAA domain; Viral (Superfamily 1) RNA helicase.
       0.821
AJI79022.1
Putative membrane protein; PFAM: DoxX.
 
     0.679
AJI79021.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
       0.432
AJI77988.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal.
    
   0.407
AJI78073.1
Dienelactone hydrolase-like enzyme; PFAM: Alpha/beta hydrolase family.
    
   0.407
AJI79799.1
PFAM: Secretory lipase.
    
   0.407
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.