STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79032.1Methyltransferase family protein; PFAM: Methyltransferase domain. (260 aa)    
Predicted Functional Partners:
AJI79033.1
Hypothetical protein; PFAM: RDD family.
       0.832
AJI79998.1
Hypothetical protein.
  
     0.679
rpsA
Ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1.
       0.621
AJI79083.1
Hypothetical protein.
 
     0.547
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.534
pimA
Phosphatidylinositol alpha-mannosyltransferase; PFAM: Glycosyltransferase Family 4; Glycosyl transferases group 1.
  
     0.437
AJI78917.1
RecB family exonuclease; PFAM: PD-(D/E)XK nuclease superfamily.
  
     0.429
AJI79938.1
PFAM: Putative peptidoglycan binding domain; VanW like protein.
  
     0.408
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.