STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79057.1Putative transcriptional regulator; Contains C-terminal CBS domains. (240 aa)    
Predicted Functional Partners:
AJI79058.1
PFAM: NADPH-dependent FMN reductase; TIGRFAM: LLM-partnered FMN reductase, CE1759 family; FMN reductase, MsuE subfamily.
       0.737
tdcG
PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form.
       0.680
AJI79056.1
PFAM: Phosphate transporter family.
  
   0.610
AJI79055.1
PFAM: Putative neutral zinc metallopeptidase.
       0.537
AJI79053.1
PFAM: Phosphotransferase enzyme family.
 
     0.527
AJI78635.1
Beta-fructosidase, levanase/invertase; PFAM: Glycosyl hydrolases family 32 N-terminal domain; Belongs to the glycosyl hydrolase 32 family.
  
     0.491
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.487
AJI79052.1
PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA).
  
    0.483
AJI78160.1
Hypothetical protein.
  
     0.480
AJI77872.1
PFAM: Protein of unknown function (DUF2505).
  
     0.417
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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