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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79081.1Integral membrane protein; PFAM: Domain of unknown function (DUF3817); TIGRFAM: integral membrane protein. (163 aa)    
Predicted Functional Partners:
AJI79082.1
PFAM: Protein of unknown function (DUF2029).
       0.795
tesB
PFAM: Thioesterase-like superfamily; TIGRFAM: acyl-CoA thioesterase II.
       0.686
AJI79079.1
PFAM: Transcriptional regulator; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family.
       0.599
AJI78596.1
PFAM: HNH endonuclease.
  
     0.485
AJI79467.1
PFAM: Domain of unknown function (DUF4194).
  
     0.460
AJI77897.1
PFAM: HNH endonuclease.
  
     0.458
AJI79634.1
PFAM: Thioesterase-like superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family.
  
     0.451
AJI79466.1
PFAM: Protein of unknown function (DUF3375).
  
     0.440
AJI79074.1
PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit.
   
 
 0.409
AJI80071.1
PFAM: Predicted membrane protein (DUF2339).
  
     0.409
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.