STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79085.1PFAM: Bacterial lipid A biosynthesis acyltransferase. (309 aa)    
Predicted Functional Partners:
pimA
Phosphatidylinositol alpha-mannosyltransferase; PFAM: Glycosyltransferase Family 4; Glycosyl transferases group 1.
 
  
 0.984
AJI79083.1
Hypothetical protein.
 
     0.945
AJI79086.1
CDP-diacylglycerol inositol 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.901
AJI79087.1
HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: HIT domain.
 
  
 0.866
pimB
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain.
 
   
 0.747
thrS
threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.678
AJI78917.1
RecB family exonuclease; PFAM: PD-(D/E)XK nuclease superfamily.
  
     0.605
AJI79089.1
PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; Tat-translocated enzyme.
       0.560
AJI78284.1
Hypothetical protein.
  
     0.528
AJI79090.1
PFAM: Protein of unknown function (DUF461).
       0.511
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.