Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
aftCPFAM: Protein of unknown function (DUF2029). (398 aa)    
Predicted Functional Partners:
AJI79942.1
PFAM: Domain of unknown function (DUF3367).
  
  
 0.975
AJI78767.1
PFAM: Protein of unknown function (DUF2029).
  
  
 
0.925
aftA
PFAM: Arabinofuranosyltransferase N terminal; Arabinofuranosyltransferase A C terminal.
  
   
 0.835
msrB
PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.832
AJI79962.1
Hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan- peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of arabinofuranosyl (Araf) residues residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) to the arabinan domain to form terminal beta-(1->2)- linked Araf residues, which marks the end point for AG arabinan biosynthesis before decoration with mycolic acids.
  
   
 0.827
ribD2
Pyrimidine reductase, riboflavin biosynthesis; PFAM: RibD C-terminal domain.
       0.817
embC
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: EmbC C-terminal domain; Mycobacterial cell wall arabinan synthesis protein.
  
   
 0.782
AJI78932.1
Hypothetical protein.
  
     0.774
AJI79958.1
PFAM: Cutinase.
  
     0.774
AJI78369.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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