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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79104.1PFAM: Protein of unknown function (DUF3093). (176 aa)    
Predicted Functional Partners:
AJI79102.1
PFAM: Protein of unknown function (DUF3710).
 
     0.691
AJI78321.1
PFAM: Protein of unknown function (DUF3107).
  
     0.682
AJI78856.1
PFAM: Bacterial PH domain.
  
     0.681
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.673
AJI79100.1
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase; PFAM: tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
     0.637
AJI79678.1
PFAM: Domain of unknown function (DUF2017).
  
     0.623
mptA
TIGRFAM: carotene biosynthesis associated membrane protein.
  
    0.606
AJI79865.1
Hypothetical protein.
  
     0.603
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor; PFAM: Rieske [2Fe-2S] domain.
  
     0.588
acnR
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.584
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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