Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI79122.1Superfamily II RNA helicase; PFAM: Domain of unknown function (DUF3516); Helicase conserved C-terminal domain; DEAD/DEAH box helicase. (853 aa)    
Predicted Functional Partners:
AJI79121.1
ATP-grasp superfamily enzyme; PFAM: PAC2 family.
       0.677
pfoS
Putative membrane protein, putative toxin regulator; PFAM: Phosphotransferase system, EIIC.
       0.559
hrpA
RNA helicase HrpA; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Oligonucleotide/oligosaccharide-binding (OB)-fold; Domain of unknown function (DUF3418); DEAD/DEAH box helicase; TIGRFAM: RNA helicase HrpA.
 
     0.555
AJI77605.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.538
odhI
FHA domain-containing protein; PFAM: FHA domain.
  
     0.538
AJI79124.1
Hypothetical protein.
       0.519
AJI77606.1
PFAM: Protein of unknown function (DUF2662); FHA domain.
  
     0.513
AJI79120.1
PFAM: Domain of unknown function (DUF4192).
       0.470
AJI79023.1
PFAM: Part of AAA domain; Viral (Superfamily 1) RNA helicase.
  
     0.428
AJI79125.1
Putative membrane protein; PFAM: VIT family.
       0.412
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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