STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79166.1Hypothetical protein; PFAM: YCII-related domain. (96 aa)    
Predicted Functional Partners:
cinA
PFAM: Competence-damaged protein; TIGRFAM: amidohydrolase, PncC family; Belongs to the CinA family.
       0.691
pgsA2
PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.691
AJI79163.1
Putative transcriptional regulator; PFAM: Helix-turn-helix domain.
  
    0.638
AJI79998.1
Hypothetical protein.
 
     0.561
AJI79162.1
Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family.
       0.543
AJI80010.1
PFAM: RNase_H superfamily; TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
     0.496
AJI79650.1
PFAM: Protein of unknown function (DUF3618).
  
     0.456
AJI79323.1
PFAM: Protein of unknown function (DUF552).
  
     0.430
AJI77671.1
Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) domain.
  
    0.402
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.