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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79305.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
AJI77872.1
PFAM: Protein of unknown function (DUF2505).
  
     0.773
csp1
PFAM: LGFP repeat; Putative esterase.
  
     0.764
AJI77929.1
PFAM: Protein of unknown function (DUF4229).
  
     0.761
AJI78452.1
Hypothetical protein.
  
     0.754
AJI79885.1
Hypothetical protein.
  
     0.754
AJI78907.1
Hypothetical protein.
  
     0.751
AJI79271.1
PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein.
  
     0.750
AJI79726.1
PFAM: Protein of unknown function (DUF2993).
  
     0.748
uspA2
PFAM: Universal stress protein family.
  
     0.747
AJI78900.1
Hypothetical protein.
  
     0.746
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.