STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79349.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
AJI79352.1
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
      
 0.818
pknL
PFAM: Protein kinase domain.
     
 0.750
AJI77871.1
Hypothetical protein.
  
     0.603
AJI79113.1
PFAM: Protein of unknown function (DUF3039).
  
     0.544
AJI79091.1
Uncharacterized protein, copper resistance protein CopC-like protein; PFAM: CopC domain.
  
     0.542
mntR
PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
   
    0.533
sirR2
PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
   
    0.533
kdpE
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
   
    0.497
AJI78899.1
PFAM: Protein of unknown function (DUF3097).
  
     0.492
AJI79346.1
Hypothetical protein.
  
     0.486
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.