STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknLPFAM: Protein kinase domain. (416 aa)    
Predicted Functional Partners:
odhI
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.996
AJI77606.1
PFAM: Protein of unknown function (DUF2662); FHA domain.
 
 
 
 0.992
AJI77605.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.990
ppp
PFAM: Protein phosphatase 2C.
 
 
 0.980
AJI78456.1
Hypothetical protein.
   
 
 0.840
AJI79805.1
Hypothetical protein.
   
 
 0.840
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.820
AJI79696.1
Protein-disulfide isomerase; PFAM: Thioredoxin.
      
 0.757
AJI79349.1
Hypothetical protein.
     
 0.750
AJI77601.1
PFAM: Protein kinase domain.
 
 
0.609
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.