Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI79352.1Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (169 aa)    
Predicted Functional Partners:
csm
PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type.
  
     0.774
AJI79162.1
Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family.
  
     0.774
AJI80028.1
Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family.
  
     0.774
AJI78856.1
PFAM: Bacterial PH domain.
  
     0.773
divIVA
PFAM: DivIVA protein; TIGRFAM: DivIVA domain.
  
     0.756
AJI78145.1
Hypothetical protein.
  
     0.751
AJI77900.1
PFAM: Glutaredoxin-like domain (DUF836).
  
     0.742
thyX
Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
     0.723
AJI79353.1
PFAM: Protein of unknown function (DUF2029).
 
     0.722
aroG
PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II.
     
 0.719
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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