STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79399.1Putative transcriptional regulator; PFAM: Helix-turn-helix domain. (258 aa)    
Predicted Functional Partners:
mmr
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
 
    0.682
AJI78349.1
PFAM: Bacterial regulatory proteins, tetR family.
  
    0.616
pecM
Putative permease, DMT superfamily; PFAM: EamA-like transporter family.
  
   
 0.579
AJI79398.1
PFAM: ThiF family.
       0.565
AJI79392.1
Putative transcriptional regulator.
  
     0.514
AJI78348.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.456
AJI79393.1
Putative NADH-flavin reductase; PFAM: NADH(P)-binding.
  
    0.442
AJI78390.1
Transcriptional regulator, TetR family; PFAM: Bacterial transcriptional repressor; Bacterial regulatory proteins, tetR family.
  
  
 0.420
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.