Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
htaAPFAM: Htaa. (617 aa)    
Predicted Functional Partners:
hmuT
ABC-type hemin transport system, periplasmic component; PFAM: Periplasmic binding protein.
 
  
 0.992
hmuV
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.930
AJI79408.1
Hypothetical protein.
  
  
 0.885
hmuU
ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.852
AJI79403.1
PFAM: Htaa.
 
    
0.802
hmuO
PFAM: Heme oxygenase.
 
  
 0.769
AJI79409.1
Tellurite resistance protein-like permease; PFAM: Voltage-dependent anion channel.
 
     0.760
AJI77657.1
Putative membrane protein; PFAM: Protease prsW family.
  
     0.724
AJI77740.1
PFAM: von Willebrand factor type A domain.
  
     0.632
AJI78160.1
Hypothetical protein.
  
     0.616
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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