STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79409.1Tellurite resistance protein-like permease; PFAM: Voltage-dependent anion channel. (303 aa)    
Predicted Functional Partners:
htaA
PFAM: Htaa.
 
     0.760
gltT
Na+/glutamate symporter.
  
    0.650
AJI77766.1
Putative membrane protein.
  
     0.558
AJI78760.1
Putative membrane protein.
  
     0.557
AJI78259.1
Putative membrane protein.
  
     0.544
hmuT
ABC-type hemin transport system, periplasmic component; PFAM: Periplasmic binding protein.
 
     0.519
AJI78907.1
Hypothetical protein.
  
     0.506
AJI78293.1
Hypothetical protein.
  
     0.498
AJI78733.1
PFAM: Methyltransferase domain.
 
     0.470
AJI79210.1
PFAM: Protein of unknown function (DUF2631).
  
     0.460
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.