STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI79467.1PFAM: Domain of unknown function (DUF4194). (216 aa)    
Predicted Functional Partners:
AJI79466.1
PFAM: Protein of unknown function (DUF3375).
 
   
 0.987
AJI79469.1
PFAM: Uncharacterized protein conserved in bacteria N-term (DUF3322); Uncharacterized protein conserved in bacteria C-term(DUF2220).
 
   
 0.986
AJI79468.1
Hypothetical protein; PFAM: Putative exonuclease SbcCD, C subunit; P-loop containing region of AAA domain.
 
   
 0.971
AJI79465.1
Hypothetical protein.
       0.473
AJI79081.1
Integral membrane protein; PFAM: Domain of unknown function (DUF3817); TIGRFAM: integral membrane protein.
  
     0.460
AJI77769.1
TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.
  
     0.436
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.