STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI79468.1Hypothetical protein; PFAM: Putative exonuclease SbcCD, C subunit; P-loop containing region of AAA domain. (1122 aa)    
Predicted Functional Partners:
AJI79466.1
PFAM: Protein of unknown function (DUF3375).
 
   0.993
AJI79467.1
PFAM: Domain of unknown function (DUF4194).
 
 
   0.981
AJI79469.1
PFAM: Uncharacterized protein conserved in bacteria N-term (DUF3322); Uncharacterized protein conserved in bacteria C-term(DUF2220).
 
     0.958
AJI78896.1
Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family.
  
   0.712
ribE
PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit.
      
 0.615
AJI79465.1
Hypothetical protein.
       0.473
AJI79464.1
Hypothetical protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
 
     0.427
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.