Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cmrAShort-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)    
Predicted Functional Partners:
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
 
 0.962
AJI79745.1
PFAM: Putative esterase.
  
  
  0.936
cmtB
PFAM: Putative esterase.
  
  
 0.933
AJI78237.1
PFAM: Putative esterase.
  
  
  0.931
AJI77858.1
PFAM: Putative esterase.
  
  
 0.930
AJI79549.1
PFAM: Putative esterase.
  
  
  0.928
fabG1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like; PFAM: short chain dehydrogenase.
 
 
 
 0.666
AJI79958.1
PFAM: Cutinase.
  
   
 0.624
csp1
PFAM: LGFP repeat; Putative esterase.
  
   
 0.557
embC
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: EmbC C-terminal domain; Mycobacterial cell wall arabinan synthesis protein.
 
   
 0.551
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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